Trycycler: working towards the perfect bacterial genome Ryan Wick, Kathryn HoltLong-read assembly has progressed rapidly in recen... #genome assembly #long reads #bacteria
Session Talk Systematic benchmarking of detection tools for CpG methylation from Nanopore sequencing Zaka Yuen, Cameron Jack, Eduardo EyrasNanopore sequencing can access native DNA at singl... #long reads #DNA methylation #benchmarking #DNA sequencing
Reference-free reconstruction and quantification of transcriptomes from Nanopore long-read sequencing Ivan de la Rubia, Joel Indi, Silvia Carbonell-Sala, Julien Lagarde, Mar Alba, Eduardo EyrasSingle-molecule long-read sequencing with Nanopore... #long reads #transcriptomics #benchmarking #reference-free
Molecular barcoding of native RNAs using nanopore sequencing and deep learning Martin A. Smith, Tansel Ersavas, James Ferguson, Huanle Liu, Morghan C. Lucas, Oguzhan Begik, Lilly Bojarski, Kirston Barton, Eva Maria NovoaNanopore sequencing enables direct measurement of ... #long reads #transcriptomics #deep learning #methods
Session Talk Mapping cancer transcriptomes with long-read sequencing Stephen Kazakoff, Pamela Mukhopadhyay, Futoshi Kawamata, Catherine Bond, Katia Nones, Akinobu Takeomi, Vicki Whitehall, Ann-Marie PatchWhilst tissue-specific transcript expression is hi... #long reads #transcriptomics #cancer #disease #alternative splicing
Session Talk JAFFAL: Detecting fusion genes with long read transcriptome sequencing Nadia Davidson, Ying Chen, Jonathan Göke, Alicia OshlackGenomic rearrangements are common in the cancer la... #long reads #transcriptomics #cancer
Is it a Mammal Thing? Determining When the Change in rDNA Unit Size Occurred in Amniotes Emma Macdonald, Austen Ganley, Richard EdwardsThe ribosomal RNA genes in eukaryotes are organise... #long reads #evolution #DNA sequencing #rDNA #non-model organisms
Session Talk Comprehensive characterization of single cell full-length isoforms in human and mouse with long-read sequencing Luyi Tian, Jafar Jabbari, Matthew RitchieAlternative splicing shapes the phenotype of cells... #single cell genomic #long-reads #single cell multi-omics #transcriptomic
